BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029G03SP1|AL429102
(844 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1131 1657 0.0
>3x_Contig1131
Length = 5958
Score = 1657 bits (835), Expect = 0.0
Identities = 843/845 (99%), Gaps = 1/845 (0%)
Strand = Plus / Plus
Query: 1 gatcttgcgaaatgagcgtaccgtggaacaggaaagacgtgcggttttgtcaaataacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3676 gatcttgcgaaatgagcgtaccgtggaacaggaaagacgtgcggttttgtcaaataacgt 3735
Query: 61 acggtgtatccgtgcctgtgtgtgtagttcacatttacactggtaagggaagctccaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3736 acggtgtatccgtgcctgtgtgtgtagttcacatttacactggtaagggaagctccaagt 3795
Query: 121 cacgtggtttgatcacgtgcctgaagatatttccttctgcttcgtcgtttcgagtcaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3796 cacgtggtttgatcacgtgcctgaagatatttccttctgcttcgtcgtttcgagtcaagt 3855
Query: 181 taccattgcaatccatgagcmagtcttgaaacacttgccattggtcttcgtccacatagc 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3856 taccattgcaatccatgagcaagtcttgaaacacttgccattggtcttcgtccacatagc 3915
Query: 241 agtcccaataggagtttggttcaccaacgttgacttgcaatccggcgtgcgcgtcctggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3916 agtcccaataggagtttggttcaccaacgttgacttgcaatccggcgtgcgcgtcctggc 3975
Query: 301 gcac-ctctcttggtctggaagtgaaaacctactcccgtcctcgttggctggatcgttcc 359
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3976 gcacgctctcttggtctggaagtgaaaacctactcccgtcctcgttggctggatcgttcc 4035
Query: 360 agttccacgtcatatgctgtgccctggcataatggtaagtcttaatgcccgaatcgaggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4036 agttccacgtcatatgctgtgccctggcataatggtaagtcttaatgcccgaatcgaggt 4095
Query: 420 agctcatgaatgtttcagtcaagcgttgaatacactcttgctttcttttctatttgttat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4096 agctcatgaatgtttcagtcaagcgttgaatacactcttgctttcttttctatttgttat 4155
Query: 480 gtacatttgtttcattatattgttatgttattgtgtatgcgtgtgccattattgccggaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4156 gtacatttgtttcattatattgttatgttattgtgtatgcgtgtgccattattgccggaa 4215
Query: 540 ttcccagttttttcaatggggttgatatgactggtcatgtggttaggtaagaagcaccgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4216 ttcccagttttttcaatggggttgatatgactggtcatgtggttaggtaagaagcaccgt 4275
Query: 600 ctaactaacggacgtacttcataatagtaatgtagggcgtaattcacatcactaggatat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4276 ctaactaacggacgtacttcataatagtaatgtagggcgtaattcacatcactaggatat 4335
Query: 660 ccttcattagccttatctccttgccactcggaatattttccgattccttctattcctcga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4336 ccttcattagccttatctccttgccactcggaatattttccgattccttctattcctcga 4395
Query: 720 gtctaattagaaagtgaactttcccatgaaaactcttggcacagtatatttaaacattca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4396 gtctaattagaaagtgaactttcccatgaaaactcttggcacagtatatttaaacattca 4455
Query: 780 caccggaacatagacattgtacaaaaggagaaaagaagttcaagcaaaacaccccccatc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4456 caccggaacatagacattgtacaaaaggagaaaagaagttcaagcaaaacaccccccatc 4515
Query: 840 ttacc 844
|||||
Sbjct: 4516 ttacc 4520
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4930
Number of Sequences: 1807
Number of extensions: 4930
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 844
length of database: 10,358,551
effective HSP length: 16
effective length of query: 828
effective length of database: 10,329,639
effective search space: 8552941092
effective search space used: 8552941092
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)